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Test Code CGSNPO Cytogenomic SNP Array, Products of Conception

Important Note

Chorionic villi preferred

Specimen and Container/Tube

Products of conception (Chorionic villi) or other fetal tissues collected in a sterile specimen container w/ transport media (provided by the lab) or sterile saline.

Rejection Criteria

Formalin fixed tissue cannot be processed by the laboratory; Non-pregnancy tissue (at the discretion of the section director or supervisor)

Critical Values

N/A

Turnaround Time

N/A

LOINC Codes

N/A

Volume

Preferred:  100+mg of tissue

Minimum:  40mg of tissue

Specimen Stability

Refrigerate at 4°C and deliver to laboratory within 24 hours of specimen collection.  

Last Review Date

12/7/2022

Collection Instructions

Specimen should be collected in a sterile specimen cup with transport media (provided by the lab) or sterile saline.  Refrigerate at 4°C and deliver to laboratory within 24 hours of specimen collection.  

Additional Information

SNP Array Test Limitations:  Will not detect balanced translocations, low level mosaicism, some instances of uiparental disomy, point mutations and small insertion/deletions.

CPT

88235; 81229

Reference Values

Interpretative Report

Clinical Indications

Indication for chromosome analysis with reflex to SNP array testing of products of conception include:  pregnancy loss of unknown etiology; fetal anomalies; parental chromosome abnormality; clarification of ambiguous chromosomal findings; detection of chromosome rearrangements; failiure of tissue to grow in culture.

Specimen Handling & Transport Instructions

Refrigerate at 4°C and deliver to laboratory within 24 hours of specimen collection.  POC speimen can be tubed to J-601  (Tube station #461)

Test Components

This array includes 2.67 million markers for copy number (CN) analysis including approximately 750,000 SNP probes, and 1.9 million non-polymorphic probes for whole genome coverage.

Methodology

SNP Microarray

Synonyms/Key Search Words

Microarray, SNP, gen hyb, ACGH, Gene, Whole Gene, CGH