Test Code CGSNPB CYTOGENOMIC SNP ARRAY, PERIPHERAL BLOOD
Specimen and Container/Tube
Whole peripheral blood in one EDTA (purple top) tube and one NaHp (green top) tube
Specimen Handling and Transport Instructions
Keep at room temperature and deliver within 24 hours. Specimen can be tubed to J-601 (tube station #461).
Rejection Criteria
>48 hours old, incorrect anticoagulant, clotted,hemolyzed
Reference Values
Interpretative Report
Critical Values
N/A
Turnaround Time
N/A
CPT Codes
81229
LOINC Codes
N/A
Volume
1-3mL of peripheral blood in both the EDTA tube and NaHp tube
Collection Instructions
Whole blood collected in the following tubes: 1-3ml in an EDTA (purple top) tube and 1-3ml of blood in a NaHp (green top) tube. Keep at room temperature and tube to lab within 24 hours.
Additional Information
SNP Array Test Limitations: Will not detect balanced translocations, low level mosaicism,
some instances of uiparental disomy, point mutations and small insertion/deletions.
Container/Tube
Green (Sodium Heparin) Tube
Special Instructions
Keep at room temperature and deliver within 24 hours. Call
laboratory at 2-6203 for sample pick up.
Reject Due To
Whole blood/unspun samples greater than 6 hours will be
rejected.
Clinical Indications
Indication for testing include: Individuals with developmental delay/intellectual disability (with or without dysmorphic
features), multiple congenital anomalies, autism spectrum disorder/pervasive developmental disorder, epilepsy/seizures, heart defects, family history of a chromosomal abnormality resulting in a genomic imbalance.
Test Components
This array includes 2.67 million markers for copy number (CN) analysis including approximately 750,000 SNP probes, and 1.9 million non-polymorphic probes for whole genome coverage.
Methodology
SNP Microarray
Synonyms/Key Search Words
Microarray, SNP, gen hyb, ACGH, Gene, Whole Gene, CGH